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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933459.1_cds_XP_016479748.1_71257
CDS Infomation

[gene=LOC107800998] [db_xref=GeneID:107800998] [protein=aspartate aminotransferase, cytoplasmic isoform X2] [protein_id=XP_016479748.1] [location=join(4156..4172,4266..4349,4834..4933,5019..5139,5382..5545,5682..5819,6198..6319,6411..6505,6688..6808,7230..7314)] [gbkey=CDS]
Sequence

ATGCTCGTCAATGACACGTCTCGGGTGAAGGAGTATCTCTCAATTACTGGACTAGCGGAT
TTTAACAAACTGAGTGCAAAGCTTATATTTGGTGCTGACAGCCCTGCCATTCAAGAGAAC
AGGGTGACTACTGTTCAGTGCTTGTCGGGCACAGGTTCTTTGAGGGTTGGGGCTGAATTT
CTGGCTAAGCATTATCATGAACATACCATATATATACCACAGCCAACATGGGGAAACCAT
CCGAAGGTTTTCACTTTAGCCGGGCTTTCAGTAAAATATTACCGTTACTACGACCCAGCA
ACACGAGGCCTGGATTTCCAAGGACTTTTGGATGATCTTGCTGCTGCACCCGCTGGAGCA
ATAGTTCTTCTCCATGCATGTGCTCATAACCCAACTGGCGTTGATCCAACAAATGACCAG
TGGGAGAAAATCAGGCAGTTGATGAGGTCCAAGGGCCTGTTGCCTTTCTTTGACAGTGCT
TACCAGGGTTTTGCCAGTGGCAACCTAGATGCAGATGCACAATCTGTTCGCATGTTTGTG
GCTGATGGTGGTGAATGTCTTGCAGCTCAGAGTTATGCCAAAAACATGGGACTGTATGGG
GAGCGTGTTGGTGCCCTTAGCATTGTTTGCAAAGACGCAGATGTTGCAAGCAGAGTCGAA
AGCCAGCTAAAGCTGGTTATCAGGCCAATGTACTCTAATCCACCAATTCATGGTGCGTCT
ATTGTTGCTACTATACTCAAGGACAGACAAATGTACGATGAATGGACAATTGAGCTGAAA
GCAATGGCCGACAGGATTATTAGCATGCGCCAACAACTCTTTGATGCCTTGCAAGCTCGA
GGTACGACAGGTGATTGGAGTCATATCATCAAGCAAATTGGAATGTTTACTTTCACAGGA
TTAAATACTGAGCAAGTTTCATTCATGACTAGAGAGCATCACATTTACATGACATCTGAT
GGGAGAATTAGCATGGCAGGCCTTAGTTCTCGCACAATTCCTCATCTTGCCGATGCCATA
CATGCTGCTGTTACCAAAGCGGCCTAA

Peptide Sequence

PEP ID

XP_016479748.1
PEP Infomation

PREDICTED: aspartate aminotransferase, cytoplasmic isoform X2 [Nicotiana tabacum]
Sequence

MLVNDTSRVKEYLSITGLADFNKLSAKLIFGADSPAIQENRVTTVQCLSGTGSLRVGAEF
LAKHYHEHTIYIPQPTWGNHPKVFTLAGLSVKYYRYYDPATRGLDFQGLLDDLAAAPAGA
IVLLHACAHNPTGVDPTNDQWEKIRQLMRSKGLLPFFDSAYQGFASGNLDADAQSVRMFV
ADGGECLAAQSYAKNMGLYGERVGALSIVCKDADVASRVESQLKLVIRPMYSNPPIHGAS
IVATILKDRQMYDEWTIELKAMADRIISMRQQLFDALQARGTTGDWSHIIKQIGMFTFTG
LNTEQVSFMTREHHIYMTSDGRISMAGLSSRTIPHLADAIHAAVTKAA

Transcript Sequence

Gene sequence data has not been registered.